OncoDB.HCC Expression View

Gene name : CD9
Ensembl ID ENSG00000010278
Description CD9 antigen (p24) (Leukocyte antigen MIC3) (Motility-related protein) (MRP-1) (Tetraspanin-29) (Tspan-29). [Source:Uniprot/SWISSPROT;Acc:P21926]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
34 percent with 2 folds change ( 13 up and 6 down in 55 paired-arrays )
With wet-lab experimental data from previous reports.
Experimental evidence down     Method -- QPCR    
>> Link to terminologies used in OncoDB.HCC
Reference expression data
down     EST and cDNA Microarray - - Xu et al., PNAS 98:15089 (2001)
Links Entrez Gene     Entrez Gene     Entrez Gene    
Display nearby genome region Chr 12 from 1179134 bp to 11217686 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 727251 -- IMAGE clone locate on exon ( tblastx )
CH2 (-1.94) HK1 (1.43) HK3 (1.19) HK4 (0.26) HK5 (0.54) HK7 (0.41) HK9 (1.27) HK11 (1.28) HK12 (0.09) HK13 (-0.91) HK14 (1.48) HK15 (0.29) HK16 (0.66) HK18 (-1.10) HK19 (0.89) HK20 (-0.34) HK21 (1.27) HK22 (-0.53) HK24 (-0.04) HK27 (0.00) HK28 (1.05) HK29 (-0.79) HK31 (1.75) HK33 (2.46) HK36 (-0.22) HK37 (1.20) HK38 (0.29) HK39 (-0.28) HK42 (-1.29) HK46 (-0.79) HK47 (1.21) HK49 (1.46) HK62 (-0.35) HK63 (-0.44) HK64 (0.10) HK67 (-0.84) HK84 (-1.98) HK85 (-0.58) SF1 (0.24) SF12 (-0.21) SF15 (0.82) SF17 (-2.23) SF18 (0.46) SF21 (1.39) SF22 (0.06) SF23 (-0.37) SF32 (-0.60) SF34 (0.00) SF35 (0.30) SF3 (-1.53) SF30 (-0.88) HK2 (0.39) HK23 (0.82) HK41 (-0.65) SF4 (-0.15) SF8 (0.14) SF9 (-0.18)