OncoDB.HCC Expression View

Gene name : SEMA3B
Ensembl ID ENSG00000012171
Description Semaphorin-3B precursor (Semaphorin V) (Sema V) (Sema A(V)). [Source:Uniprot/SWISSPROT;Acc:Q13214]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
12 percent with 2 folds change ( 4 up and 3 down in 54 paired-arrays )
With wet-lab experimental data from previous reports.
Experimental evidence down     Method -- RT-PCR, Methylation, LOH    
>> Link to terminologies used in OncoDB.HCC
Links Entrez Gene    
Display nearby genome region Chr 3 from 45280044 bp to 55289574 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 809892 -- IMAGE clone locate on exon ( tblastx )
CH2 (-1.09) HK1 (-0.06) HK3 (-0.43) HK4 (-0.11) HK5 (-0.56) HK7 (-0.50) HK9 (-0.48) HK11 (0.46) HK12 (-0.38) HK13 (0.08) HK14 (0.54) HK15 (0.41) HK16 (0.01) HK18 (0.27) HK19 (0.26) HK20 (0.27) HK21 (0.12) HK22 (-0.52) HK24 (-0.26) HK27 (1.06) HK28 (-0.66) HK29 (-0.69) HK31 (-0.86) HK33 (-0.76) HK36 (0.00) HK37 (0.12) HK38 (0.02) HK39 (0.54) HK42 (1.24) HK46 (0.61) HK47 (-0.07) HK49 (-0.76) HK62 (0.82) HK63 (-0.61) HK64 (-0.85) HK67 (0.00) HK84 (0.97) HK85 (-0.20) SF1 (0.86) SF12 (-0.86) SF15 (-1.10) SF17 (-0.72) SF18 (1.27) SF21 (0.00) SF22 (-1.42) SF23 (0.00) SF32 (-0.29) SF34 (0.22) SF35 (0.78) SF3 (-0.87) SF30 (0.22) HK2 (-0.62) HK23 (-0.19) HK41 (-0.08) SF4 (0.69) SF8 (-0.75) SF9 (1.18)