OncoDB.HCC Expression View

Gene name : SNAI2
Ensembl ID ENSG00000019549
Description Zinc finger protein SLUG (Neural crest transcription factor Slug) (Snail homolog 2). [Source:Uniprot/SWISSPROT;Acc:O43623]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
18 percent with 2 folds change ( 4 up and 6 down in 55 paired-arrays )
With wet-lab experimental data from previous reports.
Experimental evidence up     Method -- QPCR    
>> Link to terminologies used in OncoDB.HCC
Links Entrez Gene    
Display nearby genome region Chr 8 from 44992802 bp to 54996541 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 204737 -- IMAGE clone locate on exon ( tblastx )
293339 -- IMAGE clone locate on exon ( tblastx )
CH2 (-0.61) HK1 (0.35) HK3 (0.99) HK4 (0.08) HK5 (1.01) HK7 (2.81) HK9 (-1.51) HK11 (-0.10) HK12 (-0.10) HK13 (-0.85) HK14 (-0.69) HK15 (0.35) HK16 (-0.42) HK18 (1.40) HK19 (-0.57) HK20 (-0.58) HK21 (0.14) HK22 (0.27) HK24 (0.10) HK27 (-0.16) HK28 (-0.01) HK29 (-0.58) HK31 (0.53) HK33 (-0.34) HK36 (0.98) HK37 (-0.92) HK38 (0.10) HK39 (-0.29) HK42 (-1.32) HK46 (-0.48) HK47 (0.79) HK49 (-0.18) HK62 (0.11) HK63 (-1.60) HK64 (-0.84) HK67 (0.54) HK84 (-1.54) HK85 (-2.37) SF1 (0.56) SF12 (0.33) SF15 (0.47) SF17 (0.94) SF18 (0.00) SF21 (0.02) SF22 (0.00) SF23 (0.85) SF32 (-0.19) SF34 (-1.24) SF35 (-0.53) SF3 (-0.28) SF30 (-0.67) HK2 (0.46) HK23 (0.82) HK41 (2.09) SF4 (-0.66) SF8 (0.67) SF9 (-0.46)