OncoDB.HCC Expression View

Gene name : SCP2
Ensembl ID ENSG00000116171
Description Nonspecific lipid-transfer protein (EC 2.3.1.176) (Propanoyl-CoA C- acyltransferase) (NSL-TP) (Sterol carrier protein 2) (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi) (SCPX). [Source:Uniprot/SWISSPROT;Acc:P22307]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
33 percent with 2 folds change ( 3 up and 16 down in 56 paired-arrays )
With wet-lab experimental data from previous reports.
Reference expression data
down     EST and cDNA Microarray - - Xu et al., PNAS 98:15089 (2001)
down     Stanford Microarray - - Chen et al., Mol Biol Cell. 13:1929 (2002)
down     Proteomic Analysis - - Li et al., Mol Cell Proteomics 3:399 (2004)
down     Proteomic Analysis - - Liang et al., Proteomics 5:2258 (2005)
Links Entrez Gene     Entrez Gene     Entrez Gene    
Display nearby genome region Chr 1 from 48165536 bp to 58289870 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 855395 -- IMAGE clone locate on exon ( tblastx )
1872828 -- IMAGE clone locate on exon ( tblastx )
CH2 (-0.97) HK1 (-0.46) HK3 (-0.19) HK4 (0.54) HK5 (-0.71) HK7 (0.61) HK9 (-0.63) HK11 (-0.49) HK12 (-1.37) HK13 (1.21) HK14 (-0.07) HK15 (-0.40) HK16 (0.11) HK18 (-0.67) HK19 (-0.49) HK20 (-0.20) HK21 (-1.36) HK22 (-0.10) HK24 (-0.15) HK27 (-1.07) HK28 (0.78) HK29 (-0.74) HK31 (0.78) HK33 (1.54) HK36 (-1.17) HK37 (-0.83) HK38 (-1.27) HK39 (-0.57) HK42 (0.00) HK46 (-0.56) HK47 (-0.19) HK49 (-1.16) HK62 (-0.07) HK63 (0.45) HK64 (-0.15) HK67 (-1.05) HK84 (-1.09) HK85 (-1.35) SF1 (-0.31) SF12 (-0.95) SF15 (0.55) SF17 (0.45) SF18 (-2.60) SF21 (-0.30) SF22 (-1.84) SF23 (0.37) SF32 (1.10) SF34 (0.26) SF35 (-0.26) SF3 (-1.20) SF30 (-1.02) HK2 (-1.08) HK23 (-1.04) HK41 (-0.44) SF4 (-0.93) SF8 (-0.89) SF9 (-1.70)