OncoDB.HCC Expression View

Gene name : SNAI1
Ensembl ID ENSG00000124216
Description Zinc finger protein SNAI1 (Protein snail homolog) (Protein sna). [Source:Uniprot/SWISSPROT;Acc:O95863]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
55 percent with 2 folds change ( 1 up and 26 down in 49 paired-arrays )
With wet-lab experimental data from previous reports.
Experimental evidence up     Method -- QPCR    
>> Link to terminologies used in OncoDB.HCC
Reference expression data
down     Stanford Microarray - - Chen et al., Mol Biol Cell. 13:1929 (2002)
Links Entrez Gene    
Display nearby genome region Chr 20 from 43032934 bp to 53038825 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 810119 -- IMAGE clone locate on exon ( tblastx )
CH2 (0.00) HK1 (-1.55) HK3 (-1.03) HK4 (-1.44) HK5 (0.00) HK7 (-1.42) HK9 (-0.40) HK11 (-0.12) HK12 (-0.74) HK13 (-2.17) HK14 (-2.30) HK15 (-0.29) HK16 (-1.12) HK18 (-1.39) HK19 (-1.28) HK20 (-0.76) HK21 (0.26) HK22 (-0.26) HK24 (-2.47) HK27 (-1.49) HK28 (-0.81) HK29 (-0.54) HK31 (-0.91) HK33 (-1.91) HK36 (-0.42) HK37 (-2.08) HK38 (-1.30) HK39 (-1.52) HK42 (0.00) HK46 (-1.76) HK47 (0.00) HK49 (0.14) HK62 (-0.27) HK63 (-3.10) HK64 (-2.24) HK67 (-0.77) HK84 (-1.58) HK85 (-3.84) SF1 (-0.53) SF12 (-0.25) SF15 (-1.39) SF17 (-3.66) SF18 (0.00) SF21 (3.08) SF22 (0.00) SF23 (-2.40) SF32 (-1.48) SF34 (-0.85) SF35 (-0.49) SF3 (-1.78) SF30 (0.00) HK2 (0.00) HK23 (0.40) HK41 (-2.28) SF4 (-0.05) SF8 (0.41) SF9 (0.46)