OncoDB.HCC Expression View

Gene name : RARA
Ensembl ID ENSG00000131759
Description Retinoic acid receptor alpha (RAR-alpha). [Source:Uniprot/SWISSPROT;Acc:P10276]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
30 percent with 2 folds change ( 14 up and 1 down in 49 paired-arrays )
With wet-lab experimental data from previous reports.
Experimental evidence up     Method -- Western, RT-PCR    
>> Link to terminologies used in OncoDB.HCC
Links Entrez Gene    
Display nearby genome region Chr 17 from 30718972 bp to 40767420 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 461516 -- IMAGE clone locate on exon ( blastn )
CH2 (0.00) HK1 (0.61) HK3 (-0.22) HK4 (0.43) HK5 (1.65) HK7 (2.24) HK9 (1.63) HK11 (0.11) HK12 (0.53) HK13 (0.64) HK14 (0.88) HK15 (0.28) HK16 (-0.11) HK18 (-0.58) HK19 (-0.34) HK20 (1.69) HK21 (0.46) HK22 (-0.05) HK24 (-0.14) HK27 (-0.65) HK28 (0.88) HK29 (1.81) HK31 (2.70) HK33 (0.00) HK36 (0.00) HK37 (1.14) HK38 (1.82) HK39 (0.06) HK42 (-1.11) HK46 (0.14) HK47 (0.00) HK49 (0.47) HK62 (0.52) HK63 (-0.16) HK64 (2.26) HK67 (1.10) HK84 (0.31) HK85 (0.68) SF1 (1.63) SF12 (0.41) SF15 (0.33) SF17 (0.00) SF18 (0.00) SF21 (1.24) SF22 (0.00) SF23 (-0.30) SF32 (0.89) SF34 (0.36) SF35 (-0.07) SF3 (0.00) SF30 (1.57) HK2 (0.17) HK23 (0.64) HK41 (0.08) SF4 (-0.79) SF8 (1.37) SF9 (0.68)