OncoDB.HCC Expression View

Gene name : CHI3L1
Ensembl ID ENSG00000133048
Description Chitinase-3-like protein 1 precursor (Cartilage glycoprotein 39) (GP- 39) (39 kDa synovial protein) (HCgp-39) (YKL-40). [Source:Uniprot/SWISSPROT;Acc:P36222]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
71 percent with 2 folds change ( 9 up and 28 down in 52 paired-arrays )
With wet-lab experimental data from previous reports.
Links Entrez Gene    
Display nearby genome region Chr 1 from 196414553 bp to 206422500 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 770212 -- IMAGE clone locate on exon ( tblastx )
CH2 (0.00) HK1 (0.86) HK3 (-2.82) HK4 (-3.05) HK5 (3.65) HK7 (-2.38) HK9 (0.00) HK11 (-0.40) HK12 (2.08) HK13 (-0.95) HK14 (0.27) HK15 (1.30) HK16 (1.41) HK18 (-1.96) HK19 (-1.61) HK20 (-2.56) HK21 (0.00) HK22 (0.32) HK24 (-4.04) HK27 (-0.24) HK28 (-1.40) HK29 (-3.66) HK31 (-3.68) HK33 (-3.33) HK36 (-1.10) HK37 (-2.68) HK38 (-0.62) HK39 (-1.34) HK42 (-2.62) HK46 (-3.45) HK47 (-4.14) HK49 (5.79) HK62 (-1.17) HK63 (0.98) HK64 (-3.67) HK67 (-2.52) HK84 (0.00) HK85 (2.16) SF1 (-2.25) SF12 (-5.51) SF15 (-2.69) SF17 (-0.22) SF18 (-0.86) SF21 (4.06) SF22 (-0.65) SF23 (-2.21) SF32 (2.68) SF34 (1.55) SF35 (-2.24) SF3 (-0.55) SF30 (0.00) HK2 (0.44) HK23 (-2.51) HK41 (-2.58) SF4 (0.33) SF8 (0.72) SF9 (-2.61)