OncoDB.HCC Expression View

Gene name : C10orf116
Ensembl ID ENSG00000148671
Description Adipose most abundant gene transcript 2. [Source:Uniprot/SWISSPROT;Acc:Q15847]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
78 percent with 2 folds change ( 5 up and 39 down in 56 paired-arrays )
With wet-lab experimental data from previous reports.
Reference expression data
up     EST and cDNA Microarray - - Xu et al., PNAS 98:15089 (2001)
down     Stanford Microarray - - Chen et al., Mol Biol Cell. 13:1929 (2002)
Links Entrez Gene    
Display nearby genome region Chr 10 from 83717929 bp to 93720652 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 183315 -- IMAGE clone locate on exon ( tblastx )
358030 -- IMAGE clone locate on exon ( tblastx )
740941 -- IMAGE clone locate on exon ( tblastx )
CH2 (0.10) HK1 (-0.29) HK3 (-1.15) HK4 (-1.22) HK5 (1.91) HK7 (-2.67) HK9 (-1.29) HK11 (-1.08) HK12 (-1.61) HK13 (-1.99) HK14 (-3.96) HK15 (-2.62) HK16 (-1.32) HK18 (-1.77) HK19 (-0.76) HK20 (-2.00) HK21 (-1.87) HK22 (-0.53) HK24 (-1.70) HK27 (-3.23) HK28 (-1.32) HK29 (-0.07) HK31 (-2.49) HK33 (-1.15) HK36 (-2.51) HK37 (-1.66) HK38 (-1.53) HK39 (-2.10) HK42 (0.36) HK46 (1.16) HK47 (0.00) HK49 (-2.83) HK62 (-0.48) HK63 (-1.53) HK64 (-2.03) HK67 (-1.13) HK84 (-2.18) HK85 (-0.93) SF1 (1.94) SF12 (-2.11) SF15 (-1.70) SF17 (0.32) SF18 (1.00) SF21 (0.73) SF22 (2.34) SF23 (-0.62) SF32 (-2.17) SF34 (-1.15) SF35 (-1.03) SF3 (-2.07) SF30 (-3.46) HK2 (-1.19) HK23 (-1.10) HK41 (-0.95) SF4 (-1.58) SF8 (-1.16) SF9 (-4.46)