OncoDB.HCC Expression View

Gene name : 727728
Ensembl ID ENSG00000159403
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
49 percent with 2 folds change ( 2 up and 26 down in 57 paired-arrays )
With wet-lab experimental data from previous reports.
Reference expression data
down     cDNA Microarray - - Okabe et al., Cancer Res. 61:2129 (2001)
up     EST and cDNA Microarray - - Xu et al., PNAS 98:15089 (2001)
down     PCR Array - - Kurokawa et al., J Hepatol. 39:1004 (2003)
down     Stanford Microarray - - Chen et al., Mol Biol Cell. 13:1929 (2002)
Links Entrez Gene    
Display nearby genome region Chr 12 from 2058091 bp to 12135416 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 83549 -- IMAGE clone locate on exon ( tblastx )
376416 -- IMAGE clone locate on exon ( tblastx )
CH2 (-3.15) HK1 (-1.27) HK3 (-1.91) HK4 (-3.97) HK5 (0.89) HK7 (-0.15) HK9 (-1.08) HK11 (-1.51) HK12 (-0.56) HK13 (-0.72) HK14 (-3.37) HK15 (-7.36) HK16 (-5.27) HK18 (-1.21) HK19 (-2.08) HK20 (-1.74) HK21 (-1.31) HK22 (0.86) HK24 (-0.70) HK27 (-0.26) HK28 (-0.37) HK29 (0.13) HK31 (0.29) HK33 (-0.02) HK36 (-0.62) HK37 (-3.88) HK38 (0.95) HK39 (-0.50) HK42 (-2.25) HK46 (-0.43) HK47 (-5.53) HK49 (0.15) HK62 (0.39) HK63 (-2.06) HK64 (-1.61) HK67 (-1.63) HK84 (-1.33) HK85 (0.72) SF1 (-1.77) SF12 (-3.43) SF15 (-0.68) SF17 (-0.41) SF18 (-0.77) SF21 (0.56) SF22 (2.85) SF23 (-1.15) SF32 (3.42) SF34 (0.59) SF35 (-0.72) SF3 (-0.55) SF30 (0.74) HK2 (-3.81) HK23 (-1.56) HK41 (-0.25) SF4 (-0.56) SF8 (-0.08) SF9 (-2.15)