OncoDB.HCC Expression View

Gene name : SSX4_HUMAN
Ensembl ID ENSG00000198946
Description Protein SSX4. [Source:Uniprot/SWISSPROT;Acc:O60224]
HCC significant gene
Significantly up- or down- regulated in at least three independent HCC microarray/proteomic reports.
At least 2 folds expression change in more than 70% patients in reprocessed Stanford HCC microarray data.
55 percent with 2 folds change ( 23 up and 3 down in 47 paired-arrays )
With wet-lab experimental data from previous reports.
Experimental evidence up     Method -- RT-PCR    
>> Link to terminologies used in OncoDB.HCC
Links Entrez Gene     Entrez Gene    
Display nearby genome region Chr X from 43146468 bp to 53156393 bp

Standford microarray data
Re-analysis of Stanford microarray data
IMAGE clone 291290 -- IMAGE clone locate on exon ( tblastx )
CH2 (0.00) HK1 (1.41) HK3 (1.24) HK4 (4.22) HK5 (-1.14) HK7 (2.99) HK9 (-0.81) HK11 (-0.40) HK12 (2.46) HK13 (-0.58) HK14 (1.39) HK15 (3.40) HK16 (0.00) HK18 (3.24) HK19 (0.00) HK20 (4.12) HK21 (1.80) HK22 (0.56) HK24 (0.27) HK27 (0.00) HK28 (-0.34) HK29 (-0.33) HK31 (5.27) HK33 (0.99) HK36 (0.63) HK37 (0.00) HK38 (-1.82) HK39 (5.62) HK42 (0.00) HK46 (-0.48) HK47 (0.00) HK49 (0.00) HK62 (2.29) HK63 (5.18) HK64 (3.23) HK67 (0.00) HK84 (0.00) HK85 (1.05) SF1 (0.00) SF12 (5.20) SF15 (0.00) SF17 (2.16) SF18 (0.00) SF21 (-1.01) SF22 (3.91) SF23 (0.00) SF32 (1.89) SF34 (0.27) SF35 (1.89) SF3 (0.00) SF30 (6.57) HK2 (0.00) HK23 (0.71) HK41 (0.00) SF4 (0.10) SF8 (-0.05) SF9 (4.72)